batch_mode.py File Reference

Namespaces
namespace	batch_mode

Functions
	batch_mode.test ()
	define various functions needed for later
	batch_mode.compute ()
	batch_mode.generate_plots ()
	batch_mode.display_plots ()
	batch_mode.save_plots ()

Variables
	batch_mode.comp_tab
	batch_mode.plot_tab
	batch_mode.vis_tab
	batch_mode.mode
	batch_mode.params
	batch_mode.file_path = comp_tab.text_input("Initial structure file:",key="file_path")
	lets set up the computation tab
	batch_mode.file_format = comp_tab.text_input("File format:", key="file_format",placeholder="Auto")
	batch_mode.processed
	batch_mode.manual_config = comp_tab.checkbox("Manually specify configuration", key="manual_config")
	batch_mode.config_file
	batch_mode.key
	Set up visualisation tab.
	batch_mode.config_name
	batch_mode.atoms
	batch_mode.radii
	batch_mode.manual_compute = comp_tab.checkbox("Manually specify settings for the computations (i.e number of threds, and if you want to compute kernel/image/cokernel)", key="maual_comp_config")
	batch_mode.same_config_file = comp_tab.checkbox("The computation settings are in the same configuration file.", key="same_config_file")
	batch_mode.comp_file
	batch_mode.comp_name
	batch_mode.sample_start
	batch_mode.sample_end
	batch_mode.sample_step
	batch_mode.repeat_x
	batch_mode.repeat_y
	batch_mode.repeat_z
	batch_mode.kernel
	batch_mode.image
	batch_mode.cokernel
	batch_mode.thickness
	batch_mode.placeholder
	batch_mode.n_threads
	batch_mode.on_click
	batch_mode.pd_checks = plot_tab.columns(3)
	Set up the plot tab.
	batch_mode.apf_checks = plot_tab.columns(3)
	batch_mode.plot_buttons = plot_tab.columns(3)
	batch_mode.selected_row
	batch_mode.dimension
	batch_mode.vis_dgm
	batch_mode.dfVis
list	batch_mode.to_display = ["birth", "death", "lifetime"]
	batch_mode.viz = vis_tab.dataframe(st.session_state.dfVis[to_display], on_select="rerun")