Functions
	test ()
	define various functions needed for later

	compute ()

	generate_plots ()

	display_plots ()

	save_plots ()

Variables
	comp_tab

	plot_tab

	vis_tab

	mode

	params

	file_path = comp_tab.text_input("Initial structure file:",key="file_path")
	lets set up the computation tab

	file_format = comp_tab.text_input("File format:", key="file_format",placeholder="Auto")

	processed

	manual_config = comp_tab.checkbox("Manually specify configuration", key="manual_config")

	config_file

	key
	Set up visualisation tab.

	config_name

	atoms

	radii

	manual_compute = comp_tab.checkbox("Manually specify settings for the computations (i.e number of threds, and if you want to compute kernel/image/cokernel)", key="maual_comp_config")

	same_config_file = comp_tab.checkbox("The computation settings are in the same configuration file.", key="same_config_file")

	comp_file

	comp_name

	sample_start

	sample_end

	sample_step

	repeat_x

	repeat_y

	repeat_z

	kernel

	image

	cokernel

	thickness

	placeholder

	n_threads

	on_click

	pd_checks = plot_tab.columns(3)
	Set up the plot tab.

	apf_checks = plot_tab.columns(3)

	plot_buttons = plot_tab.columns(3)

	selected_row

	dimension

	vis_dgm

	dfVis

list	to_display = ["birth", "death", "lifetime"]

	viz = vis_tab.dataframe(st.session_state.dfVis[to_display], on_select="rerun")

Function Documentation

◆ compute()

deprecated__batch_mode.compute ( )

◆ display_plots()

deprecated__batch_mode.display_plots ( )

◆ generate_plots()

deprecated__batch_mode.generate_plots ( )

◆ save_plots()

deprecated__batch_mode.save_plots ( )

◆ test()

deprecated__batch_mode.test ( )

define various functions needed for later

Variable Documentation

◆ apf_checks

deprecated__batch_mode.apf_checks = plot_tab.columns(3)

◆ atoms

deprecated__batch_mode.atoms

◆ cokernel

deprecated__batch_mode.cokernel

◆ comp_file

deprecated__batch_mode.comp_file

◆ comp_name

deprecated__batch_mode.comp_name

◆ comp_tab

deprecated__batch_mode.comp_tab

◆ config_file

deprecated__batch_mode.config_file

◆ config_name

deprecated__batch_mode.config_name

◆ dfVis

deprecated__batch_mode.dfVis

◆ dimension

deprecated__batch_mode.dimension

◆ file_format

deprecated__batch_mode.file_format = comp_tab.text_input("File format:", key="file_format",placeholder="Auto")

◆ file_path

deprecated__batch_mode.file_path = comp_tab.text_input("Initial structure file:",key="file_path")

lets set up the computation tab

◆ image

deprecated__batch_mode.image

◆ kernel

deprecated__batch_mode.kernel

◆ key

deprecated__batch_mode.key

Set up visualisation tab.

◆ manual_compute

deprecated__batch_mode.manual_compute = comp_tab.checkbox("Manually specify settings for the computations (i.e number of threds, and if you want to compute kernel/image/cokernel)", key="maual_comp_config")

◆ manual_config

deprecated__batch_mode.manual_config = comp_tab.checkbox("Manually specify configuration", key="manual_config")

◆ mode

deprecated__batch_mode.mode

◆ n_threads

deprecated__batch_mode.n_threads

◆ on_click

deprecated__batch_mode.on_click

◆ params

deprecated__batch_mode.params

◆ pd_checks

deprecated__batch_mode.pd_checks = plot_tab.columns(3)

Set up the plot tab.

◆ placeholder

deprecated__batch_mode.placeholder

◆ plot_buttons

deprecated__batch_mode.plot_buttons = plot_tab.columns(3)

◆ plot_tab

deprecated__batch_mode.plot_tab

◆ processed

deprecated__batch_mode.processed

◆ radii

deprecated__batch_mode.radii

◆ repeat_x

deprecated__batch_mode.repeat_x

◆ repeat_y

deprecated__batch_mode.repeat_y

◆ repeat_z

deprecated__batch_mode.repeat_z

◆ same_config_file

deprecated__batch_mode.same_config_file = comp_tab.checkbox("The computation settings are in the same configuration file.", key="same_config_file")

◆ sample_end

deprecated__batch_mode.sample_end

◆ sample_start

deprecated__batch_mode.sample_start

◆ sample_step

deprecated__batch_mode.sample_step

◆ selected_row

deprecated__batch_mode.selected_row

◆ thickness

deprecated__batch_mode.thickness

◆ to_display

list deprecated__batch_mode.to_display = ["birth", "death", "lifetime"]

◆ vis_dgm

deprecated__batch_mode.vis_dgm

◆ vis_tab

deprecated__batch_mode.vis_tab

◆ viz

deprecated__batch_mode.viz = vis_tab.dataframe(st.session_state.dfVis[to_display], on_select="rerun")

Functions

Variables